ФЭНДОМ


   LOCUS       NC_007946            5065741 bp    DNA     circular BCT 12-MAR-2007
   DEFINITION  Escherichia coli UTI89, complete genome.
   ACCESSION   NC_007946
   VERSION     NC_007946.1  GI:91209055
   KEYWORDS    .
   SOURCE      Escherichia coli UTI89
     ORGANISM  Escherichia coli UTI89
               Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
               Enterobacteriaceae; Escherichia.
   REFERENCE   1  (bases 1 to 5065741)
     AUTHORS   Chen,S.L., Hung,C.S., Xu,J., Reigstad,C.S., Magrini,V., Sabo,A.,
               Blasiar,D., Bieri,T., Meyer,R.R., Ozersky,P., Armstrong,J.R.,
               Fulton,R.S., Latreille,J.P., Spieth,J., Hooton,T.M., Mardis,E.R.,
               Hultgren,S.J. and Gordon,J.I.
     TITLE     Identification of genes subject to positive selection in
               uropathogenic strains of Escherichia coli: A comparative genomics
               approach
     JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 103 (15), 5977-5982 (2006)
      PUBMED   16585510
   REFERENCE   2  (bases 1 to 5065741)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (07-APR-2006) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 5065741)
     AUTHORS   Chen,S.L., Hung,C.-S., Xu,J., Reigstad,C.S., Magrini,V., Sabo,A.,
               Blasiar,D., Bieri,T., Meyer,R.R., Ozersky,P., Armstrong,J.R.,
               Fulton,R.S., Latreille,J.P., Spieth,J., Hooton,T.M., Mardis,E.R.,
               Hultgren,S.J. and Gordon,J.I.
     TITLE     Direct Submission
     JOURNAL   Submitted (05-JAN-2006) Molecular Microbiology, Genetics, and
               Molecular Biology and Pharmacology, Washington University School of
               Medicine, 660 South Euclid Avenue, Saint Louis, MO 63110, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000243.
               Bacteria is available by contacting Scott Hultgren
               (hultgren@borcim.wustl.edu).
               COMPLETENESS: full length.


Расположение РНК

Начало Конец Направление Длина PID Ген COG Комментарий
228524 230065 + 1542 91209055 UTI89_C0217 - 16S ribosomal RNA
230134 230207 + 74 91209055 UTI89_C0219 - 14</sub> Ile tRNA
230253 230325 + 73 91209055 UTI89_C0220 - 02</sub> Ala tRNA
230503 233406 + 2904 91209055 UTI89_C0221 - 23S ribosomal RNA
233505 233624 + 120 91209055 UTI89_C0224 - 5S ribosomal RNA
233676 233749 + 74 91209055 UTI89_C0225 - 06</sub> Asp tRNA
241899 241972 + 74 91209055 UTI89_C0235 - 06</sub> Asp tRNA
295065 295137 + 73 91209055 UTI89_C0285 - 12</sub> Thr tRNA
305699 305771 + 73 91209055 UTI89_C0294 - 12</sub> Thr tRNA
569030 569103 + 74 91209055 UTI89_C0561 - 11</sub> Arg tRNA
671218 671289 - 72 91209055 UTI89_C0661 - 05</sub> Gln tRNA
671330 671401 - 72 91209055 UTI89_C0662 - 05</sub> Gln tRNA
671453 671526 - 74 91209055 UTI89_C0663 - 16</sub> Met tRNA
671545 671616 - 72 91209055 UTI89_C0664 - 05</sub> Gln tRNA
671654 671725 - 72 91209055 UTI89_C0665 - 05</sub> Gln tRNA
671752 671833 - 82 91209055 UTI89_C0666 - 15</sub> Leu tRNA
671847 671920 - 74 91209055 UTI89_C0667 - 16</sub> Met tRNA
744282 744354 + 73 91209055 UTI89_C0740 - 10</sub> Lys tRNA
744393 744465 + 73 91209055 UTI89_C0741 - 13</sub> Val tRNA
744471 744543 + 73 91209055 UTI89_C0742 - 10</sub> Lys tRNA
744598 744670 + 73 91209055 UTI89_C0743 - 13</sub> Val tRNA
744677 744749 + 73 91209055 UTI89_C0744 - 10</sub> Lys tRNA
744801 744873 + 73 91209055 UTI89_C0745 - 10</sub> Lys tRNA
744910 744982 + 73 91209055 UTI89_C0746 - 10</sub> Lys tRNA
895679 895763 - 85 91209055 UTI89_C0897 - 08</sub> Ser tRNA
1028950 1029034 - 85 91209055 UTI89_C1039 - 08</sub> Ser tRNA
1120468 1120541 + 74 91209055 UTI89_C1126 - 11</sub> Arg tRNA
1142535 1142619 - 85 91209055 UTI89_C1153 - 08</sub> Ser tRNA
1362337 1362418 - 82 91209055 UTI89_C1426 - 18</sub> Tyr tRNA
1362455 1362536 - 82 91209055 UTI89_C1427 - 18</sub> Tyr tRNA
1404628 1404700 + 73 91209055 UTI89_C1482 - 14</sub> Ile tRNA
1404801 1404874 + 74 91209055 UTI89_C1483 - 11</sub> Arg tRNA
1782194 1782267 + 74 91209055 UTI89_C1856 - 13</sub> Val tRNA
1782275 1782348 + 74 91209055 UTI89_C1857 - 13</sub> Val tRNA
2015566 2015649 - 84 91209055 UTI89_C2110 - 15</sub> Leu tRNA
2015665 2015735 - 71 91209055 UTI89_C2111 - 19</sub> Cys tRNA
2015792 2015864 - 73 91209055 UTI89_C2112 - 01</sub> Gly tRNA
2068722 2068808 - 87 91209055 UTI89_C2174 - 08</sub> Ser tRNA
2069800 2069872 + 73 91209055 UTI89_C2176 - 07</sub> Asn tRNA
2109697 2109769 - 73 91209055 UTI89_C2198 - 07</sub> Asn tRNA
2111515 2111587 + 73 91209055 UTI89_C2200 - 07</sub> Asn tRNA
2113924 2113996 + 73 91209055 UTI89_C2203 - 07</sub> Asn tRNA
2426261 2426334 + 74 91209055 UTI89_C2467 - 03</sub> Pro tRNA
2597297 2597368 + 72 91209055 UTI89_C2633 - 11</sub> Arg tRNA
2677965 2678037 - 73 91209055 UTI89_C2727 - 02</sub> Ala tRNA
2678080 2678152 - 73 91209055 UTI89_C2728 - 02</sub> Ala tRNA
2680851 2680923 + 73 91209055 UTI89_C2732 - 13</sub> Val tRNA
2680971 2681043 + 73 91209055 UTI89_C2733 - 13</sub> Val tRNA
2681093 2681165 + 73 91209055 UTI89_C2734 - 13</sub> Val tRNA
2681173 2681245 + 73 91209055 UTI89_C2735 - 10</sub> Lys tRNA
2870341 2870460 - 120 91209055 UTI89_C2917 - 5S ribosomal RNA
2870559 2873462 - 2904 91209055 UTI89_C2918 - 23S ribosomal RNA
2873659 2873731 - 73 91209055 UTI89_C2921 - 04</sub> Glu tRNA
2873817 2875358 - 1542 91209055 UTI89_C2922 - 16S ribosomal RNA
2976587 2976660 - 74 91209055 UTI89_C3053 - 11</sub> Arg tRNA
2976727 2976800 - 74 91209055 UTI89_C3054 - 11</sub> Arg tRNA
2976868 2976941 - 74 91209055 UTI89_C3055 - 11</sub> Arg tRNA
2976948 2977037 - 90 91209055 UTI89_C3056 - 08</sub> Ser tRNA
3101730 3101803 + 74 91209055 UTI89_C3187 - 16</sub> Met tRNA
3101840 3101913 + 74 91209055 UTI89_C3188 - 16</sub> Met tRNA
3101950 3102023 + 74 91209055 UTI89_C3189 - 16</sub> Met tRNA
3177834 3177904 - 71 91209055 UTI89_C3249 - 01</sub> Gly tRNA
3287922 3287994 + 73 91209055 UTI89_C3359 - 17</sub> Phe tRNA
3443408 3443480 + 73 91209055 UTI89_C3507 - 14</sub> Ile tRNA
3538051 3538124 - 74 91209055 UTI89_C3603 - 16</sub> Met tRNA
3541905 3541988 - 84 91209055 UTI89_C3606 - 15</sub> Leu tRNA
3641214 3641333 - 120 91209055 UTI89_C3714 - 5S ribosomal RNA
3641374 3641446 - 73 91209055 UTI89_C3715 - 12</sub> Thr tRNA
3641459 3641578 - 120 91209055 UTI89_C3716 - 5S ribosomal RNA
3641673 3644576 - 2904 91209055 UTI89_C3717 - 23S ribosomal RNA
3644763 3644835 - 73 91209055 UTI89_C3720 - 02</sub> Ala tRNA
3644881 3644954 - 74 91209055 UTI89_C3721 - 14</sub> Ile tRNA
3645023 3646564 - 1542 91209055 UTI89_C3722 - 16S ribosomal RNA
3689284 3689356 - 73 91209055 UTI89_C3796 - 12</sub> Thr tRNA
3689366 3689437 - 72 91209055 UTI89_C3797 - 01</sub> Gly tRNA
3689557 3689638 - 82 91209055 UTI89_C3798 - 18</sub> Tyr tRNA
3689650 3689722 - 73 91209055 UTI89_C3799 - 12</sub> Thr tRNA
3693188 3693307 - 120 91209055 UTI89_C3806 - 5S ribosomal RNA
3693402 3696305 - 2904 91209055 UTI89_C3807 - 23S ribosomal RNA
3696502 3696574 - 73 91209055 UTI89_C3810 - 04</sub> Glu tRNA
3696660 3698201 - 1542 91209055 UTI89_C3811 - 16S ribosomal RNA
3975878 3975951 - 74 91209055 UTI89_C4085 - 03</sub> Pro tRNA
4101848 4101938 + 91 91209055 UTI89_C4211 - Sec tRNA
4202676 4204217 + 1542 91209055 UTI89_C4311 - 16S ribosomal RNA
4204303 4204375 + 73 91209055 UTI89_C4313 - 04</sub> Glu tRNA
4204572 4207475 + 2904 91209055 UTI89_C4314 - 23S ribosomal RNA
4207569 4207688 + 120 91209055 UTI89_C4317 - 5S ribosomal RNA
4207740 4207813 + 74 91209055 UTI89_C4318 - 06</sub> Asp tRNA
4207825 4207897 + 73 91209055 UTI89_C4319 - 20</sub> Trp tRNA
4242369 4242442 + 74 91209055 UTI89_C4354 - 11</sub> Arg tRNA
4242504 4242576 + 73 91209055 UTI89_C4355 - 09</sub> His tRNA
4242600 4242683 + 84 91209055 UTI89_C4356 - 15</sub> Leu tRNA
4242729 4242802 + 74 91209055 UTI89_C4357 - 03</sub> Pro tRNA
4321858 4323399 + 1542 91209055 UTI89_C4436 - 16S ribosomal RNA
4323468 4323541 + 74 91209055 UTI89_C4438 - 14</sub> Ile tRNA
4323587 4323659 + 73 91209055 UTI89_C4439 - 02</sub> Ala tRNA
4323846 4326749 + 2904 91209055 UTI89_C4440 - 23S ribosomal RNA
4326843 4326962 + 120 91209055 UTI89_C4442 - 5S ribosomal RNA
4456367 4457908 + 1542 91209055 UTI89_C4563 - 16S ribosomal RNA
4457994 4458066 + 73 91209055 UTI89_C4565 - 04</sub> Glu tRNA
4458263 4461166 + 2904 91209055 UTI89_C4566 - 23S ribosomal RNA
4461265 4461384 + 120 91209055 UTI89_C4569 - 5S ribosomal RNA
4634666 4634738 - 73 91209055 UTI89_C4731 - 17</sub> Phe tRNA
4664172 4664244 + 73 91209055 UTI89_C4763 - 01</sub> Gly tRNA
4664284 4664356 + 73 91209055 UTI89_C4764 - 01</sub> Gly tRNA
4664395 4664467 + 73 91209055 UTI89_C4765 - 01</sub> Gly tRNA
4778112 4778193 + 82 91209055 UTI89_C4877 - 15</sub> Leu tRNA
4983852 4983935 - 84 91209055 UTI89_C5075 - 15</sub> Leu tRNA
4983973 4984056 - 84 91209055 UTI89_C5076 - 15</sub> Leu tRNA
4984088 4984171 - 84 91209055 UTI89_C5077 - 15</sub> Leu tRNA

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