ФЭНДОМ


   LOCUS       NC_007516            2510659 bp    DNA     circular BCT 16-JUN-2006
   DEFINITION  Synechococcus sp. CC9605, complete genome.
   ACCESSION   NC_007516
   VERSION     NC_007516.1  GI:78211558
   KEYWORDS    .
   SOURCE      Synechococcus sp. CC9605
     ORGANISM  Synechococcus sp. CC9605
               Bacteria; Cyanobacteria; Chroococcales; Synechococcus.
   REFERENCE   1  (bases 1 to 2510659)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C.,
               Glavina,T., Hammon,N., Israni,S., Pitluck,S., Schmutz,J.,
               Martinez,M., Larimer,F., Land,M., Kyrpides,N., Ivanova,N. and
               Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Complete sequence of Synechococcus sp. CC9605
     JOURNAL   Unpublished
   REFERENCE   2  (bases 1 to 2510659)
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (28-OCT-2005) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 2510659)
     AUTHORS   Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,C., Glavina,T.,
               Hammon,N., Israni,S., Pitluck,S., Schmutz,J., Martinez,M.,
               Larimer,F., Land,M., Ivanova,N. and Richardson,P.
     CONSRTM   US DOE Joint Genome Institute
     TITLE     Direct Submission
     JOURNAL   Submitted (27-JUL-2005) US DOE Joint Genome Institute, 2800
               Mitchell Drive, Walnut Creek, CA 94598, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from CP000110.
               URL -- http://www.jgi.doe.gov
               Source DNA and bacteria available from Brian Palenik
               (bpalenik@ucsd.edu)
               Contacts: Paul Richardson (microbes@cuba.jgi-psf.org)
               Quality assurance done by JGI-Stanford
               Annotation done by JGI-ORNL and JGI-PGF
               Finishing done by JGI-PGF
               Finished microbial genomes have been curated to close all gaps with
               greater than 98% coverage of at least two independent clones. Each
               base pair has a minimum q (quality) value of 30 and the total error
               rate is less than one per 50000.
               COMPLETENESS: full length.


Расположение РНК

Начало Конец Направление Длина PID Ген COG Комментарий
40886 40957 - 72 78211558 Syncc9605_R0001 - 01</sub> Gly tRNA
81036 81107 + 72 78211558 Syncc9605_R0002 - 01</sub> Gly tRNA
151785 152114 - 330 78211558 Syncc9605_R0003 - RNA component of RNaseP
152198 152271 + 74 78211558 Syncc9605_R0004 - 11</sub> Arg tRNA
240013 240085 + 73 78211558 Syncc9605_R0005 - Xaa tRNA
259938 260011 + 74 78211558 Syncc9605_R0006 - 11</sub> Arg tRNA
292703 292784 + 82 78211558 Syncc9605_R0007 - 15</sub> Leu tRNA
300106 300178 - 73 78211558 Syncc9605_R0008 - 02</sub> Ala tRNA
336548 336621 + 74 78211558 Syncc9605_R0009 - 03</sub> Pro tRNA
354910 354998 - 89 78211558 Syncc9605_R0010 - 08</sub> Ser tRNA
381452 381523 + 72 78211558 Syncc9605_R0011 - 05</sub> Gln tRNA
394817 394890 + 74 78211558 Syncc9605_R0012 - 11</sub> Arg tRNA
410669 410739 + 71 78211558 Syncc9605_R0013 - 19</sub> Cys tRNA
443117 443192 - 76 78211558 Syncc9605_R0014 - 17</sub> Phe tRNA
465663 465734 - 72 78211558 Syncc9605_R0015 - 12</sub> Thr tRNA
473828 475267 + 1440 78211558 Syncc9605_R0016 - 16S ribosomal RNA
475473 475546 + 74 78211558 Syncc9605_R0017 - 14</sub> Ile tRNA
475556 475628 + 73 78211558 Syncc9605_R0018 - 02</sub> Ala tRNA
476063 478928 + 2866 78211558 Syncc9605_R0019 - 23S ribosomal RNA
479041 479154 + 114 78211558 Syncc9605_R0020 - 5S ribosomal RNA
494153 494224 - 72 78211558 Syncc9605_R0021 - 12</sub> Thr tRNA
494235 494316 - 82 78211558 Syncc9605_R0022 - 18</sub> Tyr tRNA
551438 551511 - 74 78211558 Syncc9605_R0023 - 11</sub> Arg tRNA
604748 604819 - 72 78211558 Syncc9605_R0024 - 13</sub> Val tRNA
619575 619648 - 74 78211558 Syncc9605_R0025 - 06</sub> Asp tRNA
620089 620161 - 73 78211558 Syncc9605_R0026 - 20</sub> Trp tRNA
778388 778474 + 87 78211558 Syncc9605_R0027 - 08</sub> Ser tRNA
814916 815016 + 101 78211558 Syncc9605_R0028 - SRP RNA; RNA component of signal recognition particle
822296 822368 - 73 78211558 Syncc9605_R0029 - 09</sub> His tRNA
835603 835684 - 82 78211558 Syncc9605_R0030 - 15</sub> Leu tRNA
838685 838771 + 87 78211558 Syncc9605_R0031 - 15</sub> Leu tRNA
895865 895937 + 73 78211558 Syncc9605_R0032 - 02</sub> Ala tRNA
943285 943373 - 89 78211558 Syncc9605_R0033 - 15</sub> Leu tRNA
1078026 1078099 - 74 78211558 Syncc9605_R0034 - 03</sub> Pro tRNA
1192409 1192495 - 87 78211558 Syncc9605_R0035 - 08</sub> Ser tRNA
1240721 1240794 + 74 78211558 Syncc9605_R0036 - 16</sub> Met tRNA
1315834 1315920 - 87 78211558 Syncc9605_R0037 - 08</sub> Ser tRNA
1546958 1547029 + 72 78211558 Syncc9605_R0038 - 10</sub> Lys tRNA
1548406 1548479 + 74 78211558 Syncc9605_R0039 - 03</sub> Pro tRNA
1654070 1654146 - 77 78211558 Syncc9605_R0040 - 16</sub> Met tRNA
1737787 1737859 + 73 78211558 Syncc9605_R0041 - 04</sub> Glu tRNA
1907303 1907375 + 73 78211558 Syncc9605_R0042 - 12</sub> Thr tRNA
1919692 1919762 - 71 78211558 Syncc9605_R0043 - 01</sub> Gly tRNA
1971387 1971458 + 72 78211558 Syncc9605_R0044 - 13</sub> Val tRNA
2063339 2063593 - 255 78211558 Syncc9605_R0045 - tmRNA
2073505 2073586 - 82 78211558 Syncc9605_R0046 - 15</sub> Leu tRNA
2135706 2135819 - 114 78211558 Syncc9605_R0047 - 5S ribosomal RNA
2135932 2138797 - 2866 78211558 Syncc9605_R0048 - 23S ribosomal RNA
2139232 2139304 - 73 78211558 Syncc9605_R0049 - 02</sub> Ala tRNA
2139314 2139387 - 74 78211558 Syncc9605_R0050 - 14</sub> Ile tRNA
2139593 2141032 - 1440 78211558 Syncc9605_R0051 - 16S ribosomal RNA
2191230 2191301 + 72 78211558 Syncc9605_R0052 - 07</sub> Asn tRNA
2385485 2385555 - 71 78211558 Syncc9605_R0053 - Xaa tRNA
2400151 2400222 - 72 78211558 Syncc9605_R0054 - 13</sub> Val tRNA

Материалы сообщества доступны в соответствии с условиями лицензии CC-BY-SA , если не указано иное.