ФЭНДОМ


   LOCUS       NC_004088            4600755 bp    DNA     circular BCT 26-JAN-2006
   DEFINITION  Yersinia pestis KIM, complete genome.
   ACCESSION   NC_004088
   VERSION     NC_004088.1  GI:22123922
   KEYWORDS    .
   SOURCE      Yersinia pestis KIM
     ORGANISM  Yersinia pestis KIM
               Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
               Enterobacteriaceae; Yersinia.
   REFERENCE   1  (bases 1 to 4600755)
     AUTHORS   Deng,W., Burland,V., Plunkett,G. III, Boutin,A., Mayhew,G.F.,
               Liss,P., Perna,N.T., Rose,D.J., Mau,B., Zhou,S., Schwartz,D.C.,
               Fetherston,J.D., Lindler,L.E., Brubaker,R.R., Plana,G.V.,
               Straley,S.C., McDonough,K.A., Nilles,M.L., Matson,J.S.,
               Blattner,F.R. and Perry,R.D.
     TITLE     Genome Sequence of Yersinia pestis KIM
     JOURNAL   J. Bacteriol. 184 (16), 4601-4611 (2002)
      PUBMED   12142430
   REFERENCE   2  (bases 1 to 4600755)
     AUTHORS   .
     CONSRTM   NCBI Genome Project
     TITLE     Direct Submission
     JOURNAL   Submitted (10-SEP-2004) National Center for Biotechnology
               Information, NIH, Bethesda, MD 20894, USA
   REFERENCE   3  (bases 1 to 4600755)
     AUTHORS   Deng,W., Burland,V., Plunkett,G. III, Boutin,A., Mayhew,G.F.,
               Liss,P., Perna,N.T., Rose,D.J., Mau,B., Zhou,S., Schwartz,D.C.,
               Fetherston,J.D., Lindler,L.E., Brubaker,R.R., Plana,G.V.,
               Straley,S.C., McDonough,K.A., Nilles,M.L., Matson,J.S.,
               Blattner,F.R. and Perry,R.D.
     TITLE     Direct Submission
     JOURNAL   Submitted (21-FEB-2002) Genetics, University of Wisconsin, 445
               Henry Mall, Madison, WI 53706, USA
   COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
               NCBI review. The reference sequence was derived from AE009952.
               COMPLETENESS: full length.


Расположение РНК

Начало Конец Направление Длина PID Ген COG Комментарий
12016 13600 + 1585 22123922 yr001 - 16S ribosomal RNA
13694 13766 + 73 22123922 yt001 - 04</sub> Glu tRNA
14022 16928 + 2907 22123922 yr002 - 23S ribosomal RNA
17036 17155 + 120 22123922 yr003 - 5S ribosomal RNA
17169 17241 + 73 22123922 yt002 - 12</sub> Thr tRNA
17285 17399 + 115 22123922 yr004 - 5S ribosomal RNA
125522 125898 - 377 22123922 ys001 - RNase P, RNA component
355930 357514 + 1585 22123922 yr005 - 16S ribosomal RNA
357608 357680 + 73 22123922 yt003 - 04</sub> Glu tRNA
357936 360842 + 2907 22123922 yr006 - 23S ribosomal RNA
360950 361069 + 120 22123922 yr007 - 5S ribosomal RNA
361193 361272 + 80 22123922 yt004 - 06</sub> Asp tRNA
361278 361350 + 73 22123922 yt005 - 20</sub> Trp tRNA
419952 420025 + 74 22123922 yt006 - 11</sub> Arg tRNA
420112 420184 + 73 22123922 yt007 - 09</sub> His tRNA
420204 420287 + 84 22123922 yt008 - 15</sub> Leu tRNA
420366 420439 + 74 22123922 yt009 - 03</sub> Pro tRNA
522393 523977 + 1585 22123922 yr008 - 16S ribosomal RNA
524037 524110 + 74 22123922 yt010 - 14</sub> Ile tRNA
524165 524237 + 73 22123922 yt011 - 02</sub> Ala tRNA
524459 527365 + 2907 22123922 yr009 - 23S ribosomal RNA
527473 527592 + 120 22123922 yr010 - 5S ribosomal RNA
534149 534221 + 73 22123922 yt012 - 12</sub> Thr tRNA
534243 534324 + 82 22123922 yt013 - 18</sub> Tyr tRNA
534477 534548 + 72 22123922 yt014 - 01</sub> Gly tRNA
534558 534630 + 73 22123922 yt015 - 12</sub> Thr tRNA
565257 566841 + 1585 22123922 yr011 - 16S ribosomal RNA
566935 567007 + 73 22123922 yt016 - 04</sub> Glu tRNA
567263 570169 + 2907 22123922 yr012 - 23S ribosomal RNA
570277 570396 + 120 22123922 yr013 - 5S ribosomal RNA
674907 674979 - 73 22123922 yt017 - 17</sub> Phe tRNA
704627 704699 + 73 22123922 yt018 - 01</sub> Gly tRNA
704794 704866 + 73 22123922 yt019 - 01</sub> Gly tRNA
769517 769600 + 84 22123922 yt020 - 15</sub> Leu tRNA
769664 769737 + 74 22123922 yt021 - 16</sub> Met tRNA
834911 834992 + 82 22123922 yt022 - 15</sub> Leu tRNA
995663 995752 + 90 22123922 yt023 - 08</sub> Ser tRNA
995764 995837 + 74 22123922 yt024 - 11</sub> Arg tRNA
995898 995971 + 74 22123922 yt025 - 11</sub> Arg tRNA
996054 996127 + 74 22123922 yt026 - 11</sub> Arg tRNA
1024389 1025973 + 1585 22123922 yr014 - 16S ribosomal RNA
1026033 1026106 + 74 22123922 yt027 - 14</sub> Ile tRNA
1026161 1026233 + 73 22123922 yt028 - 02</sub> Ala tRNA
1026455 1029361 + 2907 22123922 yr015 - 23S ribosomal RNA
1029469 1029588 + 120 22123922 yr016 - 5S ribosomal RNA
1179164 1179277 + 114 22123922 yr017 - 4.5S RNA
1249406 1249479 + 74 22123922 yt029 - 11</sub> Arg tRNA
1342164 1342235 - 72 22123922 yt030 - 05</sub> Gln tRNA
1342244 1342317 - 74 22123922 yt031 - 16</sub> Met tRNA
1342353 1342424 - 72 22123922 yt032 - 05</sub> Gln tRNA
1342511 1342582 - 72 22123922 yt033 - 05</sub> Gln tRNA
1342615 1342696 - 82 22123922 yt034 - 15</sub> Leu tRNA
1342707 1342780 - 74 22123922 yt035 - 16</sub> Met tRNA
1658581 1658659 - 79 22123922 yt036 - 02</sub> Ala tRNA
1658740 1658812 - 73 22123922 yt037 - 02</sub> Ala tRNA
1661444 1661516 + 73 22123922 yt038 - 13</sub> Val tRNA
1661556 1661628 + 73 22123922 yt039 - 13</sub> Val tRNA
1661676 1661748 + 73 22123922 yt040 - 13</sub> Val tRNA
1661951 1662023 + 73 22123922 yt041 - 10</sub> Lys tRNA
1733801 1733872 + 72 22123922 yt042 - 11</sub> Arg tRNA
2145274 2145347 - 74 22123922 yt043 - 13</sub> Val tRNA
2145410 2145483 - 74 22123922 yt044 - 13</sub> Val tRNA
2379356 2379437 + 82 22123922 yt045 - 18</sub> Tyr tRNA
2512097 2512183 + 87 22123922 yt046 - 08</sub> Ser tRNA
2520506 2520592 + 87 22123922 yt047 - 08</sub> Ser tRNA
2645436 2645508 + 73 22123922 yt048 - 07</sub> Asn tRNA
2701503 2701585 - 83 22123922 yt049 - 15</sub> Leu tRNA
2701599 2701669 - 71 22123922 yt050 - 19</sub> Cys tRNA
2701725 2701797 - 73 22123922 yt051 - 01</sub> Gly tRNA
2708249 2708321 - 73 22123922 yt052 - 10</sub> Lys tRNA
2837679 2837751 + 73 22123922 yt053 - 07</sub> Asn tRNA
2851956 2852028 + 73 22123922 yt054 - 07</sub> Asn tRNA
3007878 3007962 - 85 22123922 yt055 - 08</sub> Ser tRNA
3231057 3231130 + 74 22123922 yt056 - 03</sub> Pro tRNA
3263205 3263277 - 73 22123922 yt057 - 12</sub> Thr tRNA
3263286 3263370 - 85 22123922 yt058 - 08</sub> Ser tRNA
3361500 3361569 - 70 22123922 yt059 - Xaa tRNA
3361603 3361675 - 73 22123922 yt060 - 10</sub> Lys tRNA
3361706 3361778 - 73 22123922 yt061 - 10</sub> Lys tRNA
3388875 3389238 + 364 22123922 ys002 - 10Sa RNA (tmRNA)
3404626 3404699 - 74 22123922 yt062 - 06</sub> Asp tRNA
3411993 3412066 - 74 22123922 yt063 - 06</sub> Asp tRNA
3412190 3412309 - 120 22123922 yr018 - 5S ribosomal RNA
3412417 3415323 - 2907 22123922 yr019 - 23S ribosomal RNA
3415579 3415651 - 73 22123922 yt064 - 04</sub> Glu tRNA
3415745 3417329 - 1585 22123922 yr020 - 16S ribosomal RNA
3471666 3471739 + 74 22123922 yt065 - 16</sub> Met tRNA
3471866 3471939 + 74 22123922 yt066 - 16</sub> Met tRNA
3601512 3601582 - 71 22123922 yt067 - 01</sub> Gly tRNA
3632001 3632183 + 183 22123922 yr021 - 6S RNA
3692004 3692076 + 73 22123922 yt068 - 17</sub> Phe tRNA
3923482 3923555 + 74 22123922 yt069 - 16</sub> Met tRNA
4173142 4173225 + 84 22123922 yt070 - 15</sub> Leu tRNA
4232828 4232934 - 107 22123922 ys003 - spot 42 RNA, inhibition of DNA synthesis
4241418 4241537 - 120 22123922 yr022 - 5S ribosomal RNA
4241645 4244551 - 2907 22123922 yr023 - 23S ribosomal RNA
4244807 4244879 - 73 22123922 yt071 - 04</sub> Glu tRNA
4244973 4246557 - 1585 22123922 yr024 - 16S ribosomal RNA
4251363 4251436 + 74 22123922 yt072 - 03</sub> Pro tRNA
4494759 4494849 - 91 22123922 yt073 - Sec tRNA

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