LOCUS NC_002939 3814139 bp DNA circular BCT 18-JAN-2006
DEFINITION Geobacter sulfurreducens PCA, complete genome.
ACCESSION NC_002939
VERSION NC_002939.4 GI:39995111
KEYWORDS .
SOURCE Geobacter sulfurreducens PCA
ORGANISM Geobacter sulfurreducens PCA
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales;
Geobacteraceae; Geobacter.
REFERENCE 1 (bases 1 to 3814139)
AUTHORS Methe,B.A., Nelson,K.E., Eisen,J.A., Paulsen,I.T., Nelson,W.,
Heidelberg,J.F., Wu,D., Wu,M., Ward,N., Beanan,M.J., Dodson,R.J.,
Madupu,R., Brinkac,L.M., Daugherty,S.C., DeBoy,R.T., Durkin,A.S.,
Gwinn,M., Kolonay,J.F., Sullivan,S.A., Haft,D.H., Selengut,J.,
Davidsen,T.M., Zafar,N., White,O., Tran,B., Romero,C.,
Forberger,H.A., Weidman,J., Khouri,H., Feldblyum,T.V.,
Utterback,T.R., Van Aken,S.E., Lovley,D.R. and Fraser,C.M.
TITLE Genome of Geobacter sulfurreducens: metal reduction in subsurface
environments
JOURNAL Science 302 (5652), 1967-1969 (2003)
PUBMED 14671304
REFERENCE 2 (bases 1 to 3814139)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (11-SEP-2004) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 3814139)
AUTHORS Methe,B., Nelson,K.E., Eisen,J.A., Paulsen,I.T., Nelson,W.C.,
Heidelberg,J.F., Wu,D., Wu,M., Ward,N., Beanan,M.J., Dodson,R.J.,
Madupu,R., Brinkac,L.M., Daugherty,S.C., DeBoy,R.T., Durkin,A.S.,
Gwinn,M.L., Kolonay,J.F., Sullivan,S.A., Haft,D.H., Selengut,J.,
Davidsen,T.M., Zafar,N., White,O., Tran,B., Romero,C.,
Forberger,H.A., Weidman,J.M., Khouri,H.M., Feldblyum,T.V.,
Utterback,T.R., Van Aken,S.E., Lovley,D.R. and Fraser,C.M.
TITLE Direct Submission
JOURNAL Submitted (05-SEP-2003) The Institute for Genomic Research, 9712
Medical Center Dr, Rockville, MD 20850, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AE017180.
On Dec 17, 2003 this sequence version replaced gi:38154477.
COMPLETENESS: full length.
Расположение РНК[]
| Начало | Конец | Направление | Длина | PID | Ген | COG | Комментарий |
|---|---|---|---|---|---|---|---|
| 48681 | 48766 | + | 86 | 39995111 | tRNA-Ser-1 | - | 08 Ser tRNA |
| 48786 | 48879 | + | 94 | 39995111 | tRNA-Ser-2 | - | 08 Ser tRNA |
| 49426 | 49502 | + | 77 | 39995111 | tRNA-Arg-1 | - | 11 Arg tRNA |
| 82025 | 82114 | + | 90 | 39995111 | tRNA-Ser-3 | - | 08 Ser tRNA |
| 106424 | 106511 | + | 88 | 39995111 | tRNA-Ser-4 | - | 08 Ser tRNA |
| 311488 | 311563 | - | 76 | 39995111 | tRNA-Ala-1 | - | 02 Ala tRNA |
| 468913 | 468989 | + | 77 | 39995111 | tRNA-Pro-1 | - | 03 Pro tRNA |
| 496027 | 496102 | + | 76 | 39995111 | tRNA-Phe-1 | - | 17 Phe tRNA |
| 637706 | 637781 | - | 76 | 39995111 | tRNA-Thr-1 | - | 12 Thr tRNA |
| 684698 | 686245 | + | 1548 | 39995111 | Gs16SA | - | 16S ribosomal RNA |
| 686401 | 686477 | + | 77 | 39995111 | tRNA-Ile-1 | - | 14 Ile tRNA |
| 686483 | 686558 | + | 76 | 39995111 | tRNA-Ala-2 | - | 02 Ala tRNA |
| 686699 | 689656 | + | 2958 | 39995111 | Gs23SA | - | 23S ribosomal RNA |
| 689766 | 689877 | + | 112 | 39995111 | Gs5SA | - | 5S ribosomal RNA |
| 697860 | 697934 | + | 75 | 39995111 | tRNA-Gln-1 | - | 05 Gln tRNA |
| 909735 | 909828 | - | 94 | 39995111 | tRNA-SeC(p)-1 | - | Sec tRNA |
| 1224149 | 1225696 | + | 1548 | 39995111 | Gs16SB | - | 16S ribosomal RNA |
| 1225852 | 1225928 | + | 77 | 39995111 | tRNA-Ile-2 | - | 14 Ile tRNA |
| 1225934 | 1226009 | + | 76 | 39995111 | tRNA-Ala-3 | - | 02 Ala tRNA |
| 1226150 | 1229107 | + | 2958 | 39995111 | Gs23SB | - | 23S ribosomal RNA |
| 1229217 | 1229328 | + | 112 | 39995111 | Gs5SB | - | 5S ribosomal RNA |
| 1468378 | 1468452 | + | 75 | 39995111 | tRNA-Gly-1 | - | 01 Gly tRNA |
| 1555351 | 1555437 | - | 87 | 39995111 | tRNA-Leu-1 | - | 15 Leu tRNA |
| 1603297 | 1603383 | - | 87 | 39995111 | tRNA-Leu-2 | - | 15 Leu tRNA |
| 1603508 | 1603583 | + | 76 | 39995111 | tRNA-Ala-4 | - | 02 Ala tRNA |
| 1662002 | 1662076 | + | 75 | 39995111 | tRNA-Val-1 | - | 13 Val tRNA |
| 1669588 | 1669664 | + | 77 | 39995111 | tRNA-Pro-2 | - | 03 Pro tRNA |
| 1672860 | 1672936 | + | 77 | 39995111 | tRNA-Arg-2 | - | 11 Arg tRNA |
| 1728856 | 1728930 | - | 75 | 39995111 | tRNA-Val-2 | - | 13 Val tRNA |
| 1781724 | 1781810 | - | 87 | 39995111 | tRNA-Leu-3 | - | 15 Leu tRNA |
| 1874135 | 1874490 | + | 356 | 39995111 | GstmRNA1 | - | sRNA |
| 1953582 | 1953658 | - | 77 | 39995111 | tRNA-Asp-1 | - | 06 Asp tRNA |
| 1953718 | 1953793 | - | 76 | 39995111 | tRNA-Val-3 | - | 13 Val tRNA |
| 1953805 | 1953881 | - | 77 | 39995111 | tRNA-Asp-2 | - | 06 Asp tRNA |
| 1959741 | 1959823 | - | 83 | 39995111 | tRNA-Leu-4 | - | 15 Leu tRNA |
| 1959886 | 1959962 | - | 77 | 39995111 | tRNA-His-1 | - | 09 His tRNA |
| 1959988 | 1960064 | - | 77 | 39995111 | tRNA-Arg-3 | - | 11 Arg tRNA |
| 1960070 | 1960147 | - | 78 | 39995111 | tRNA-Pro-3 | - | 03 Pro tRNA |
| 1977219 | 1977295 | - | 77 | 39995111 | tRNA-Met-1 | - | 16 Met tRNA |
| 1977348 | 1977424 | - | 77 | 39995111 | tRNA-Met-2 | - | 16 Met tRNA |
| 1992689 | 1992763 | - | 75 | 39995111 | tRNA-Cys-1 | - | 19 Cys tRNA |
| 2036671 | 2036745 | - | 75 | 39995111 | tRNA-Glu-1 | - | 04 Glu tRNA |
| 2036816 | 2036890 | - | 75 | 39995111 | tRNA-Gln-2 | - | 05 Gln tRNA |
| 2337350 | 2337416 | - | 67 | 39995111 | tRNA-Ser-5 | - | 08 Ser tRNA |
| 2393643 | 2393717 | - | 75 | 39995111 | tRNA-Gly-2 | - | 01 Gly tRNA |
| 2869803 | 2869889 | - | 87 | 39995111 | tRNA-Leu-5 | - | 15 Leu tRNA |
| 2990873 | 2990949 | + | 77 | 39995111 | tRNA-Arg-4 | - | 11 Arg tRNA |
| 3145533 | 3145609 | - | 77 | 39995111 | tRNA-Trp-1 | - | 20 Trp tRNA |
| 3147107 | 3147182 | - | 76 | 39995111 | tRNA-Thr-2 | - | 12 Thr tRNA |
| 3147195 | 3147271 | - | 77 | 39995111 | tRNA-Gly-3 | - | 01 Gly tRNA |
| 3147382 | 3147467 | - | 86 | 39995111 | tRNA-Tyr-1 | - | 18 Tyr tRNA |
| 3147495 | 3147570 | - | 76 | 39995111 | tRNA-Thr-3 | - | 12 Thr tRNA |
| 3387878 | 3388192 | - | 315 | 39995111 | GsrnpB1 | - | sRNA |
| 3391620 | 3391696 | - | 77 | 39995111 | tRNA-Met-3 | - | 16 Met tRNA |
| 3633806 | 3633881 | + | 76 | 39995111 | tRNA-Lys-1 | - | 10 Lys tRNA |
| 3633932 | 3634009 | + | 78 | 39995111 | tRNA-Glu-2 | - | 04 Glu tRNA |
| 3725095 | 3725170 | + | 76 | 39995111 | tRNA-Asn-1 | - | 07 Asn tRNA |